This is the same thing we ran into when running 4x4890's on these motherboards. Any motherboard without an additional Molex near the PCI-E slots is prone to this issue. It is inherently a design flaw with the ATX standard and too much current is going through a single wire. There are solutions however. Just a bit of soldering and you can add additional power from a molex connector to alleviate the amount coming from the single connector in the ATX stack.
Here are a couple pics of my mod...
You basically add 12v from the molex to the backside of the 24-pin at the two 12v locations, as well as a couple grounds.
I know it isn't the best solution as it involves soldering and what not, but I am sure EVGA would be fine with it for warranty purposes if you contacted them about it. There really is no other way. That is why boards like the UD9 and R3E have additional molex connections near the PCI-E slots...to alleviate this issue.